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yfhD [2019-03-01 19:00:46]
general stress protein, survival of ethanol stress and low temperatures
function
survival of ethanol stress and low temperatures
Genomic Context
categories
[category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]Gene
Coordinates
924,210 924,401
Expression and Regulation
Operons
genes
[gene|B2924DAA879FBE56EB8DF9A7C60222AA1EE5526C|yfhF]-[gene|EE8065E719D0359B5892C8DCBCEC0B246ABE7D5B|yfhE]-[gene|29A9F7EEC3EFD8CA913877C41C1F00BCE9FF384D|yfhD]
description
[Pubmed|27965289]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon][protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|15699190], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon][protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]regulation
expressed early during sporulation in the forespore ([protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]) [Pubmed|15699190]additional information
An [ncRNA|search|antisense RNA] is predicted for '[protein|29A9F7EEC3EFD8CA913877C41C1F00BCE9FF384D|YfhD]' [PubMed|20525796]view in new tabBiological materials
Mutant
MGNA-C359 (yfhD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2357 NBRP B. subtilis, Japan]BKE08490 ([gene|29A9F7EEC3EFD8CA913877C41C1F00BCE9FF384D|yfhD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCAAATTCCCCCTAAA, downstream forward: _UP4_TAATGAAAAACCCCTTGTCTBKK08490 ([gene|29A9F7EEC3EFD8CA913877C41C1F00BCE9FF384D|yfhD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCAAATTCCCCCTAAA, downstream forward: _UP4_TAATGAAAAACCCCTTGTCTReferences
15805528,12480901,15699190,20525796